PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT00875
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family WRKY
Protein Properties Length: 282aa    MW: 30539.9 Da    PI: 9.6238
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT00875genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY35.52e-11259282124
               ---SS-EEEEEEE--TT-SS-EEE CS
      WRKY   1 ldDgynWrKYGqKevkgsefprsY 24 
               ldDgy+WrKYGqK+vkg++ pr Y
  EMT00875 259 LDDGYRWRKYGQKVVKGNPRPRYY 282
               59********************87 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM007740.0098141173IPR003657WRKY domain
Gene3DG3DSA:2.20.25.802.5E-4142174IPR003657WRKY domain
Gene3DG3DSA:2.20.25.807.0E-13244282IPR003657WRKY domain
SuperFamilySSF1182903.66E-10252282IPR003657WRKY domain
PROSITE profilePS5081116.788254282IPR003657WRKY domain
PfamPF031062.1E-7260282IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 282 aa     Download sequence    Send to blast
MADRRGDAMR QQPPYSSGHQ ERVFDGGGGP AFGNDYDTAG SSYMALLGSG VNPQQSLPPQ  60
QAWGVDEVTP PTINLTPQFS MTLATVASLW SRIPLHALGY YLHRMNDNLS ANTRSISGRA  120
TTGASTGRSS SRTPSRRGAT TSAPGNPVKK IVERSFDGCI KEITYKGRHT HPRPPEPRRA  180
GAEDAAAPSS AVGAHQEDEL SDDEDDGEEG HDIGRWSMKL NGRVAGTFVL ISGAGGPAGQ  240
RVVRKHKIIL QTPSEVDLLD DGYRWRKYGQ KVVKGNPRPR YY
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3638031e-105AK363803.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, partial cds, clone: NIASHv2019A07.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010229481.24e-43PREDICTED: probable WRKY transcription factor 3
TrEMBLR7VZK50.0R7VZK5_AEGTA; Putative WRKY transcription factor 4
STRINGBRADI1G07970.12e-42(Brachypodium distachyon)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP28753236
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G13960.12e-17WRKY DNA-binding protein 4